rsbl.royalsocietypublishing.org/content/4/4/375SimilarImportantly, the presence/absence of this GAGTA motif leads to changes in

www.jbc.org/content/early/2008/11/17/jbc.M804491200.full.pdfCachedNov 17, 2008 . Mutation of the -1531 Sp1 binding site within the artemisinin-responsive region of

alggen.lsi.upc.edu/recerca/menu_recerca.htmlCachedSimilarPROMO is a program to predict transcription factor binding sites in DNA

pubs.rsc.org/en/content/articlehtml/2017/ra/c7ra05549hOct 12, 2017 . CpG island was predicted using the online MethPrimer program and defined as

www.genetics.org/content/genetics/. /genetics.115.176172.full.pdfCachedSimilarMar 12, 2015 . sequence that is predicted to potentially bind a transcription factor of the

d-scholarship.pitt.edu/23990/1/Megan_Weber_ETD.pdfCachedJan 29, 2015 . 16 program RESCUE-ESE to predict if any SNPs found are involved in exonic

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC126252/Aug 21, 2002 . Analysis of the Atlantic salmon Pa promoter using AliBaba 2.1, showed correct

search.ror.unisa.edu.au/record/UNISA. /media/digital/open/. /pdfCached(SNPs), rs8099917 and rs12979860, predict response to (PegIFN/R) therapy in

www.scielo.br/scielo.php?script=sci_arttext&pid=S1415. CachedSimilarJul 22, 2011 . The transcription factor binding site was predicted by AliBaba 2.1 (Grabe, 2002),

atvb.ahajournals.org/content/early/. /ATVBAHA.109.193532.full.pdf?. patients were amplified, subcloned, and sequenced twice. In Silico Analyses of

www.sciencedirect.com/science/article/pii/S0303720706004448SimilarPrediction of transcription factor binding sites (TFBS) was performed using the

pediatricendocrinology.pl/?doi=10.18544/PEDM-20.04.0013CachedTranscription factor binding site localization and frequency in the IGF-1 promoter

https://www.hindawi.com/journals/bmri/2014/406909/CachedSimilarApr 5, 2014 . . the promoter sequences were subjected to search for transcription factor

www.redalyc.org/pdf/495/49538689012.pdfCachedcom/aligner/download.htm. The Alibaba 2.1 TF Bind- ing Prediction software

https://repo.lib.semmelweis.hu/bitstream/. /TNF_Keszler_2014.pdf?. CachedThe in silico transcription factor binding analysis was performed using the

citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.795. CachedSimilarJun 20, 2012 . Transcription factor binding sites predicted using Alibaba 2.1 are indicated as

onlinelibrary.wiley.com/doi/10.1002/mgg3.98/fullSimilarJul 30, 2014 . In silico analyses of the ATM variants were performed using the Protein Variation

www.thejaps.org.pk/docs/v-27-03/07.pdfCachedMeat is a source of proteins and minerals. However, red meats have high levels

www.jbiomech.com/article/S8756-3282(08)00610-8/pdfAllelic and haplotype association analyses were conducted by Haploview and

www.haematologica.org/content/. /early/. /haematol.2008.000604.full.pdfFeb 19, 2009 . sequences with potential transcriptional relevance, as revealed by using different

hub.hku.hk/handle/10722/62419Jul 13, 2010 . AliBaba 2.1 was applied to predict the putative transcription factor binding sites at

www.cpcjournal.org/doi/full/10.1597/09-227SimilarPrediction of SNP functionality revealed that the C allele in the C471T silent

gene-regulation.com/pub/programs.htmlCachedSimilarAliBaba2 is a program, developed by Niels Grabe, for predicting binding sites of transcription factor binding sites in an unknown DNA sequence using binding sites from TRANSFAC® Public.

www.molvis.org/molvis/v12/a92/v12a92-sripriya.pdfCachedSimilarJul 24, 2006 . IVS7+24G>A polymorphism resulted in the creation of binding sites for

repositorio.ul.pt/bitstream/. /ulfc090943_tm_fernando_martins.pdfCachedSimilarPairs of TF/miRNA promoters simultaneously predicted by TFBS prediction

jvi.asm.org/content/77/13/7459.fullSimilarPutative transcription factor binding sites in the retroviral promoters were

gene-regulation.com/pub/programs/alibaba2/index.htmlCachedSimilarPrediction of transcription factor binding sites by constructing matrices on the fly

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3250053/This current study was designed to understand what role the NF-κB transcription

www.jimmunol.org/content/jimmunol/194/8/3778.full.pdfNF-kB downregulated Cbl-b expression by directly binding to an 11-bp NF-kB

www1.biologie.uni-hamburg.de/b-online/library/. /nuc-geneid.htmlCachedThe program predicts whole genes, so the predicted exons always splice

digitalcommons.wayne.edu/cgi/viewcontent.cgi?article=1251&context. SimilarMay 23, 2006 . were in the promoter region; several putative transcription factor binding sites

https://www.researchgate.net/. /How_to_find_the_binding_sites_of_ transcription_factors10SimilarYou could consider using the Transfac positional weight matrices that are

journals.plos.org/plosone/article/figures?id=10.1371/journal. CachedSequences surrounding the -238 A/G polymorphism were analysed by AliBaba

en.cnki.com.cn/Article_en/CJFDTotal-JLYB201304004.htmCachedMethods The promoter sequence of hTFF3 was obtained from Genbank,and the

https://academic.oup.com/mend/article/30/8/872/2747298SimilarAug 1, 2016 . In silico analysis. The web tool Alibaba 2.1 was used to predict transcription

https://bip.weizmann.ac.il/toolbox/seq_analysis/promoters.htmlCachedSimilarJun 28, 2017 . Transcription Binding Tools. open in new windowALIBABA predicts transcription

www.cell.com/ajhg/pdf/S0002-9297(15)00489-9.pdfSimilarJan 7, 2016 . active region with binding sites for multiple transcription factors, including FOXA1,

iovs.arvojournals.org/article.aspx?articleid=2188591CachedSimilarTwo to four independent experiments were performed in triplicate (n = 6–12). In

https://springerplus.springeropen.com/articles/. /s40064-016-2404-1CachedSimilarJun 17, 2016 . This polymorphism might affect the transcription of the HOMER1 gene through

wanglab.wustl.edu/pdfs/2012_JV_Siebrasse.pdfCachedSimilarsoftware (30) and by manual identification. Prediction of putative bind- ing sites

cancerres.aacrjournals.org/content/70/9/3697SimilarMay 1, 2010 . PGE2-responsive regions of LANA-1 promoter. A, PGE2-responsive TF binding

www.jlr.org/content/early/2014/01/29/jlr.M045922.full.pdfCachedSimilarJan 29, 2014 . shown to predict intima media thickness (IMT), cardiovascular disease (CVD)

https://www.wjgnet.com/1007-9327/full/v19/i30/4935.htmCachedAug 14, 2013 . Prediction of transcription factor binding sites. Transcription factor binding sites

https://ludwig.guru/s/number+of+sites+found+inCachedIn order to assess the statistical significance of enrichment for each matrix family,

https://figshare.com/articles/. of. _/4703746CachedIn LCR, lower head arrows indicates binding of the transcription factors while in

thescipub.com/PDF/ojbsci.2015.221.226.pdfCachedThe effect of SNPs on transcription factor binding was verified using Alibaba 2.1

www.csrc.sdsu.edu/reports/AP10-10.pdfCachedSimilarposition of multiple transcription factor binding sites (TFBS) are organized into

pubmedcentralcanada.ca/pmcc/ptpicrender.fcgi?aid=146543. html. Feb 7, 2006 . Transcription factor binding site prediction. The promoter sequences of DE genes

www.nature.com/articles/tp201545Apr 14, 2015 . AliBaba 2.1 is a program for predicting binding sites of transcription factors in a

jme.endocrinology-journals.org/content/51/1/1.fullSimilarThe largest PCR product contained a novel exon of 113 bp that is located

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